PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIS99569

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 714aa MW: 81902.3 Da PI: 7.1015

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS99569	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	55.2	1.4e-17	541	587	5	51
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++ +dl+++F++++ dAA +L+v+ ++LKr CR+yGI+RWP+ k k+ OIS99569 541 VNYDDLKQHFNKNLSDAAESLQVSRSTLKRLCRKYGIRRWPSSKRKK 587 67799************************************988665 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MEGIEKSQLP VNDDVVYEVY TSSEFKNYMG ESLSCSEERS NFHLMVFWSN NETESNFPHN 60 LTETCTVKQK IKAALQRIET SQVILLQFWG LEKIEGRDFL TTSGQPFGLR YLYKGLCWYR 120 KHCQGYKYSV NNKGESAEQG TKKVHLFGPP ARVFQEKLPE SSTHVGYYTN QEFPMRDHAV 180 RCGVRTYLAL PVFEPIGKNC VGVIELVTVW KGGYLTYEVE KVLNALEGVD LKCPKLYLRK 240 GRKVQAGKQS EREEIKRMLK IVRETHKLPF VRVWIPCKNL EMDHNGMYMG CTEHVISASN 300 EVYYVADEEM DANDHVYDDY YYDDMLCFRD ISKLQPLQKD QGVVGKAFFS GKLCYCENIT 360 EFSIIEYPLV HYACWCGLTS SFAICLKSGD EVYILELFLP PDNGDPKILL GSILSTMGQH 420 FQSFKFASGQ ELGHDSSVQV IKASSDKNVD YFHIYQTRES PFMPEVLPGE ERRNRLTEGN 480 ANHMEKEATF ECTVRNSVDN GQLQTVQSDV LNTDLQVILE KQCVSVTHLQ KESRTRSKDF 540 VNYDDLKQHF NKNLSDAAES LQVSRSTLKR LCRKYGIRRW PSSKRKKTLG ESDCQPLNML 600 PKKKKAMTSA VTSTHATHGN SSSSITVKAT YGEDMMKFKL YSFSRKEDLD KELAKRLQLP 660 VGKFRIKYMD EDNDYIWIAC DDDLSDCFNN AQSLGKNTIK MLVLPAAINY SLEL

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MEGIEKSQLP VNDDVVYEVY TSSEFKNYMG ESLSCSEERS NFHLMVFWSN NETESNFPHN  60
LTETCTVKQK IKAALQRIET SQVILLQFWG LEKIEGRDFL TTSGQPFGLR YLYKGLCWYR  120
KHCQGYKYSV NNKGESAEQG TKKVHLFGPP ARVFQEKLPE SSTHVGYYTN QEFPMRDHAV  180
RCGVRTYLAL PVFEPIGKNC VGVIELVTVW KGGYLTYEVE KVLNALEGVD LKCPKLYLRK  240
GRKVQAGKQS EREEIKRMLK IVRETHKLPF VRVWIPCKNL EMDHNGMYMG CTEHVISASN  300
EVYYVADEEM DANDHVYDDY YYDDMLCFRD ISKLQPLQKD QGVVGKAFFS GKLCYCENIT  360
EFSIIEYPLV HYACWCGLTS SFAICLKSGD EVYILELFLP PDNGDPKILL GSILSTMGQH  420
FQSFKFASGQ ELGHDSSVQV IKASSDKNVD YFHIYQTRES PFMPEVLPGE ERRNRLTEGN  480
ANHMEKEATF ECTVRNSVDN GQLQTVQSDV LNTDLQVILE KQCVSVTHLQ KESRTRSKDF  540
VNYDDLKQHF NKNLSDAAES LQVSRSTLKR LCRKYGIRRW PSSKRKKTLG ESDCQPLNML  600
PKKKKAMTSA VTSTHATHGN SSSSITVKAT YGEDMMKFKL YSFSRKEDLD KELAKRLQLP  660
VGKFRIKYMD EDNDYIWIAC DDDLSDCFNN AQSLGKNTIK MLVLPAAINY SLEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	584	605	KRKKTLGESDCQPLNMLPKKKK
2	585	606	KRKKTLGESDCQPLNMLPKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	7e-88	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIS99569