PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99430
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 245aa    MW: 27103.3 Da    PI: 4.6535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99430genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-19136186255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  OIS99430 136 HYRGVRVRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDKAAFRMRG 186
               8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MMYGNCELEN DFAILESIRL HLLEDWEAPL TSSDNSTTSD LSRSNSIESN MFPNCLSNEF  60
DAADTFLFYI LNEGVGYGFE PASDFTIPNV KLEPEISIQS TEIWNSPEFV EPPETATEVE  120
MESPAVTTPP SPKGKHYRGV RVRPWGKFAA EIRDPAKNGA RVWLGTYETA EDAALAYDKA  180
AFRMRGSRAL LNFPLRVNSG EPEPIRVGSK RSSMSPEHSS SSSTSSASPP KRRKKVCQGT  240
ELAVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230236PKRRKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.15e-45ERF family protein