PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99251
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Nin-like
Protein Properties Length: 262aa    MW: 30930.3 Da    PI: 7.1816
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99251genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.44.4e-26151200352
    RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
               ++++l ++++yF+ pi++AAkeL v+lTvLK++CR+++I+RWPhRkiksl
  OIS99251 151 DTLELYEIQRYFHVPINKAAKELRVGLTVLKKRCRELNIMRWPHRKIKSL 200
               68999*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MASHVLTLEN QNDQFDWLYP EHPPSPFRTW QQQDSRILSN GGLFNFDPFQ FLNDLPNNDL  60
PFFELKELEE ICQDLGTLDV KLPPFQEDIP LNLTFSPLDE CQNVTSARNA VHMQDKNYYD  120
YTVGEIEFSS GTNNKELIRK RNNNGRHKKS DTLELYEIQR YFHVPINKAA KELRVGLTVL  180
KKRCRELNIM RWPHRKIKSL QTLIDSVKEM GLTSEVEMLE EHQRMLEKVP EMELTERTKK  240
LRQTCFKANY KKRRAAMAAF SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.12e-41Nin-like family protein