PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99221
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 270aa    MW: 31024.9 Da    PI: 8.2216
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99221genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.67.1e-34561961128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....tk..sgyWka 85 
               lp+G++F+P+d+e++ e+Lk+kv +++      +  +e+i+++d    i++++P++Lp  v++e +  +fF++ +++y+tg+rk+r+    t+  + +W++
  OIS99221  56 LPAGVKFDPSDQEIL-EHLKAKVFSDTnklhplI--NEFIPTIDgengICYTHPEKLP-GVNKEGQIRHFFHRPSRAYTTGSRKRRKihtnTEdgETRWHK 152
               799***********9.99****999995554332..223444444445**********.666677788******************745553344667*** PP

       NAM  86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
               tgk+++v+  +g l+g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  OIS99221 153 TGKTRPVFI-SGVLKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 196
               *********.999***********66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MTWCNESNDQ ESLQLIQTPL EEKSVIISKF GTITCPSCGH SIELQDQRGI HDLPGLPAGV  60
KFDPSDQEIL EHLKAKVFSD TNKLHPLINE FIPTIDGENG ICYTHPEKLP GVNKEGQIRH  120
FFHRPSRAYT TGSRKRRKIH TNTEDGETRW HKTGKTRPVF ISGVLKGYKK ILVLYTNYGR  180
QRKPEKTNWV MHQYHLGDNE EEKEGELVVS KVFYQTQPRQ CGSRISLIRQ DNNPIIKTPN  240
FIDYYNPPFI SYQDDNSSIL NVTSNNASKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-122NAC family protein