PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS99036

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HB-other

Protein Properties

Length: 569aa MW: 61660.8 Da PI: 4.6217

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS99036	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.3	3.9e-06	14	74	7	55
--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 f+++++ e+e+ + p +e LA+k ++ +qV +WFqNrR+ OIS99036 14 FNATEVAEMEAILQAhnATMPAREVLVALAEKFsssaersgkiMVQMKQVWNWFQNRRYAI 74 666666777777764325567777777888888888888887799*************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MGRPPSNGGP TFRFNATEVA EMEAILQAHN ATMPAREVLV ALAEKFSSSA ERSGKIMVQM 60 KQVWNWFQNR RYAIRAKTAK VPGKFSTPSV PQSDPAMVRT PAKLSASSPV PQSDPAAVRI 120 MPQASLPIPS PQVTVKSMPQ APQPLPAPSV AVQNVGRSAS DNIQMEFEAK SARDGAWYDV 180 ASFLSHRSVE TADPEVLVRF AGFGAEEDEW VNVRKHVRQR SLPCESSECV AVLPGDLILC 240 FQEGKEQALY FDAHVLDAQR RRHDVRGCRC RFLVRYDHDQ SEEIVPLRKV CRRPETDYRL 300 QQLNAESLKQ QKIGNDITRG NTTKVYPPAE TTQKAQTESR IKPAEPTQKQ PAPEDTTKPV 360 PNVAPMQLQK SSTDSLTGNT LVETTTQCME EMTEKPVAGT TEVPDEAPEK SPVEAPAETA 420 GKSPAETTLE PPAASTSKPD EAPEEPPTET TLKPPAASTT KPDEAPEQPP AEATLKPPAP 480 STSNPDEAPE EPPAETTLEP PAETTLEPPA DSTSKPAEES EEPPAETTLK PPVDSTSKPA 540 EAPVEQPKEE EHVDAGATAA SMDHDNASV

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MGRPPSNGGP TFRFNATEVA EMEAILQAHN ATMPAREVLV ALAEKFSSSA ERSGKIMVQM  60
KQVWNWFQNR RYAIRAKTAK VPGKFSTPSV PQSDPAMVRT PAKLSASSPV PQSDPAAVRI  120
MPQASLPIPS PQVTVKSMPQ APQPLPAPSV AVQNVGRSAS DNIQMEFEAK SARDGAWYDV  180
ASFLSHRSVE TADPEVLVRF AGFGAEEDEW VNVRKHVRQR SLPCESSECV AVLPGDLILC  240
FQEGKEQALY FDAHVLDAQR RRHDVRGCRC RFLVRYDHDQ SEEIVPLRKV CRRPETDYRL  300
QQLNAESLKQ QKIGNDITRG NTTKVYPPAE TTQKAQTESR IKPAEPTQKQ PAPEDTTKPV  360
PNVAPMQLQK SSTDSLTGNT LVETTTQCME EMTEKPVAGT TEVPDEAPEK SPVEAPAETA  420
GKSPAETTLE PPAASTSKPD EAPEEPPTET TLKPPAASTT KPDEAPEQPP AEATLKPPAP  480
STSNPDEAPE EPPAETTLEP PAETTLEPPA DSTSKPAEES EEPPAETTLK PPVDSTSKPA  540
EAPVEQPKEE EHVDAGATAA SMDHDNASV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-127	HB-other family protein

Link Out ? help Back to Top
Ensembl	OIS99036