PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS98869

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ZF-HD

Protein Properties

Length: 851aa MW: 94966.8 Da PI: 6.3702

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98869	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	92.2	4.8e-29	611	666	3	59
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +++Y eClkNhAas+Ggha+DGCgEfmps g+egt+ alkC AC+CH nFHR ev + OIS98869 611 SIQYGECLKNHAASMGGHAIDGCGEFMPS-GREGTPGALKCEACNCHINFHRNEVIN 666 689***********************9.999*****************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 851 aa Download sequence
MAAPKVDIID SENQKPKPYV RYTTYMGCPA VIFSKEYWDA AAAKCRLTLV GKFFNRKPKM 60 TAIRASFSAK YPLKDHVKIA SYDSLHVFLD FTNEEDYDAI LFKEMIIVAG AQMEVFRWTP 120 EFHGPFTKMK PDNHTAKVEG RDETLGIMEL DKNEHVGGGN EYGSKESEAA PKNTHILEDG 180 LYISDSVDCV PEATRSDSEE RVGSPVNCST ETSEIQASTE TSHSGSSGLS FASDGIAGRI 240 PSVMDDSSSV CSTDSMSFRG TYSNNNSQKL YGRGWKYGSK STSNAADWAS EKLNQPLDAL 300 PIGEYLEDRK SRPPIQVQYS TYTGRQAVTF PENYWESLVP DCRLTLIGNF FQRKPRMKEI 360 RADFIAKNPL KGQVKITHYT SQQVSLDFTN EADYDTVLSK KTLTVAGAVM QIYWWSRDIH 420 HEVDVAVSHH GELTEADRER HSLEMPKSET AVLLNVDPHK AVEPKAMEKP LVQSVSITTE 480 KFPSNQVTAS ATAEMPMPLL PTLPLLAHSV SPAAQLCADP STAIDTYVPQ SYPNEIVGSH 540 ILGRSEQAGS GSIFPSPSQA SHQHSLAQRH NQLNSYKVDR DTHLDQEPNM IAGPTQLQSL 600 LTTSVSNTTS SIQYGECLKN HAASMGGHAI DGCGEFMPSG REGTPGALKC EACNCHINFH 660 RNEVINHRQM AGIGSHIEPR NNSCSRYIHK QSQISQQYQH NYSHSYSPSS VVNSSDSYPQ 720 LPLPISGQVC LPQGLERIEP SLIRPSYSYE MVNHDTVQNG QQWEYSWRDR SRNTSIDHPS 780 LRNENRNFDM FKPLNYRTPD HIPSEFANEF PHLDIINNLL YDEHGIGKTS MPNSGFQNLR 840 NGSYHLNGHF T

Sequence ? help Back to Top

Protein Sequence Length: 851 aa Download sequence

MAAPKVDIID SENQKPKPYV RYTTYMGCPA VIFSKEYWDA AAAKCRLTLV GKFFNRKPKM  60
TAIRASFSAK YPLKDHVKIA SYDSLHVFLD FTNEEDYDAI LFKEMIIVAG AQMEVFRWTP  120
EFHGPFTKMK PDNHTAKVEG RDETLGIMEL DKNEHVGGGN EYGSKESEAA PKNTHILEDG  180
LYISDSVDCV PEATRSDSEE RVGSPVNCST ETSEIQASTE TSHSGSSGLS FASDGIAGRI  240
PSVMDDSSSV CSTDSMSFRG TYSNNNSQKL YGRGWKYGSK STSNAADWAS EKLNQPLDAL  300
PIGEYLEDRK SRPPIQVQYS TYTGRQAVTF PENYWESLVP DCRLTLIGNF FQRKPRMKEI  360
RADFIAKNPL KGQVKITHYT SQQVSLDFTN EADYDTVLSK KTLTVAGAVM QIYWWSRDIH  420
HEVDVAVSHH GELTEADRER HSLEMPKSET AVLLNVDPHK AVEPKAMEKP LVQSVSITTE  480
KFPSNQVTAS ATAEMPMPLL PTLPLLAHSV SPAAQLCADP STAIDTYVPQ SYPNEIVGSH  540
ILGRSEQAGS GSIFPSPSQA SHQHSLAQRH NQLNSYKVDR DTHLDQEPNM IAGPTQLQSL  600
LTTSVSNTTS SIQYGECLKN HAASMGGHAI DGCGEFMPSG REGTPGALKC EACNCHINFH  660
RNEVINHRQM AGIGSHIEPR NNSCSRYIHK QSQISQQYQH NYSHSYSPSS VVNSSDSYPQ  720
LPLPISGQVC LPQGLERIEP SLIRPSYSYE MVNHDTVQNG QQWEYSWRDR SRNTSIDHPS  780
LRNENRNFDM FKPLNYRTPD HIPSEFANEF PHLDIINNLL YDEHGIGKTS MPNSGFQNLR  840
NGSYHLNGHF T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50890.1	2e-21	ZF-HD family protein

Link Out ? help Back to Top
Ensembl	OIS98869