PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98845
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 339aa    MW: 36995.9 Da    PI: 6.5156
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98845genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.5e-10188232554
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               h+++Er RR+ri +++  L+el+P++      K + a++L +  +Y+k L
  OIS98845 188 HSIAERLRRERISERIKALQELVPSC-----NKTDRAAMLDEILDYVKFL 232
               99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MPTKARKAKT VIPFHFRSSK PFTNFFSPDK NLFFSPEIIS GMASNQPEGY ADDFLEQILA  60
IPSYAGLPPV ADVGTSSETT SFTSASAAAA GLQQPLFPLG LSLDNGRDDV SDAGAYAVKH  120
EREGINIGNL YAGLEHLQSH AVRHAVPPVH HIQPFQGQPT TSTTVTVPHP PAIRPRVRAR  180
RGQATDPHSI AERLRRERIS ERIKALQELV PSCNKTDRAA MLDEILDYVK FLRLQVKVLS  240
MSRLGGASAV AQLVADIPLQ SVEGDSAESR SNQHIWEKWS NVDTEQEVAK LMEEDVGAAM  300
QYLQSKSLCI MPISLAALIY PSQQPDDPSM VKPEPAAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193198RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.36e-62bHLH family protein