PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98516
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 381aa    MW: 41546 Da    PI: 6.1359
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98516genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.91.4e-18308342135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  OIS98516 308 CSHCGVQKTPQWRAGPMGAKTLCNACGVRFKSGRL 342
               *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MLYRTQHHSF FSPFNPFTFS SSLSPHPLPP PSSSSSPSPL SHSPSDQGMD CVEGALKSSF  60
MSEAALKTNH QQAYGDDLWA NGNGQNVVSG DDFFVDDLLD FSNGFVEDQG EEEKGEDNAV  120
HKICSVSVSV SPQKQLEDKE AEKENDTVSP PAKEDFDSLP GSELIVPADD LDSLEWLSHF  180
VEDSFSEYSL TYPAGKLPVK PVVNQSEDCE IPVQEKSCFI TPVQTKARTK RGRTSVRVWP  240
AGSGSLTESS SSSSSSSSTT TMSSSPSNWV LYQIPVHTAE SPGKPLAKKP KRKPAVQGGN  300
GPQQPRRCSH CGVQKTPQWR AGPMGAKTLC NACGVRFKSG RLLPEYRPAC SPTFSSELHS  360
NNHRKVLEMR RKKEFEESGS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.29e-69GATA family protein