PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS98356 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | DBB | ||||||||
Protein Properties | Length: 235aa MW: 26132.5 Da PI: 4.5949 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 18.4 | 4.4e-06 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ +++ C ++ lC++C e H H+ OIS98356 4 QCDVCEKAQATVICCADEAALCAQCDIEVHAAnklaskHQ 43 7******99*********************6566666665 PP | |||||||
2 | zf-B_box | 28.8 | 2.5e-09 | 53 | 95 | 2 | 38 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + + C+ +++k + +fC +++ l+C+dC +++H+ H+ OIS98356 53 KLPPCDICQDKAAFIFCVEDRALFCKDCDEAIHSAsslaanHQ 95 6789*****************************6566666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MKIQCDVCEK AQATVICCAD EAALCAQCDI EVHAANKLAS KHQRLHLQCL SNKLPPCDIC 60 QDKAAFIFCV EDRALFCKDC DEAIHSASSL AANHQRFLAT GIRVALSSSC NKDAVKTQLE 120 PPQPPQQNSQ QVSLKMPPHQ LSGITSPSWP VDDFLGFPDY DSTDKKELLE LGELEWLGDI 180 DLFGEQTAAE VPELSVSQSS NTHNIYKQTR YQMSYKKPRI EIPDDDEYFT VPDLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 5e-82 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS98356 |