PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98356
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family DBB
Protein Properties Length: 235aa    MW: 26132.5 Da    PI: 4.5949
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98356genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box18.44.4e-06443538
  zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
               C+ +e+ +++  C  ++  lC++C  e H        H+
  OIS98356  4 QCDVCEKAQATVICCADEAALCAQCDIEVHAAnklaskHQ 43
              7******99*********************6566666665 PP

2zf-B_box28.82.5e-095395238
  zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
              + + C+ +++k + +fC +++ l+C+dC +++H+       H+
  OIS98356 53 KLPPCDICQDKAAFIFCVEDRALFCKDCDEAIHSAsslaanHQ 95
              6789*****************************6566666665 PP

Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MKIQCDVCEK AQATVICCAD EAALCAQCDI EVHAANKLAS KHQRLHLQCL SNKLPPCDIC  60
QDKAAFIFCV EDRALFCKDC DEAIHSASSL AANHQRFLAT GIRVALSSSC NKDAVKTQLE  120
PPQPPQQNSQ QVSLKMPPHQ LSGITSPSWP VDDFLGFPDY DSTDKKELLE LGELEWLGDI  180
DLFGEQTAAE VPELSVSQSS NTHNIYKQTR YQMSYKKPRI EIPDDDEYFT VPDLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06040.15e-82DBB family protein