PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS98353

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 1001aa MW: 109307 Da PI: 5.7566

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98353	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.1e-29	595	646	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ OIS98353 595 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 646 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1001 aa Download sequence
MERGVGFWAS PRSQMEGVVS FDAGARSSNV DDSFNNVMEI MNLDAYTGWC TSPSAAEQMF 60 ASYAASSQIN SVSQSYAPFE GLSYTEQNTG TFPPMDANMV GSTDCGGEKM MFGQNDEQLH 120 FVVDSTDGGG LVAKRSKNSS QQANDADISN SMIVRSPSQP LAERMLRALA MFKESSGAGI 180 LAQVWIPMKN KDQYVLSTCE QPYLLDQALS GYREVSRKFT FDAETKPGSI PGLPGRVFSS 240 RIPEWTSNVL YYKEAEYLRV QYAVSHEVRG SIALPVFEDD AYETPCCAVL ELVTMKEKPN 300 FDLEMDHVCR ALQVVNLRSI APPRLHSQSL SKNQRAALAE ITDVLRAVCH AHKLPLALTW 360 IPCSITEGEG DESIRVLARG CNASSNEKCV LCAEDTACYV SDKEMQGFVH ACMEHYLELG 420 EGIVGKALQS NHPFFYPDVK EYHISEYPLV HHARKFGLNA AVAIRLRSTF TGNDDYILEF 480 FLPISMKGST EQQLLLNNLS GTMQRICRSL RTVSDAELVG QGATFGLQDG FAPNLPPITL 540 SRRNSQHSLD SNSNSASVAP LGVSDSKNAG IQADGSREQT MIGSRRQMEK KRSTAEKHVS 600 LSVLQQYFSG SLKDAAKSIG VCPTTLKRIC RQHGISRWPS RKINKVNRSL KKIQTVLESV 660 QGVEGGLKFD PATGGLVPAS SIIQDFDAQQ SIFFPCKDVS VKNPSSVFQD AVSVPSTSGV 720 DKENSMVKME EDSYVDGNQL GQSNHINTSS FKGGNKSSIP VSGFCYEPKL AALDAMSSRP 780 ANQTMPLTNS RNASLGSFYT KEGCGRWGLD NDTLDNLECH FTSRCSYSKA AGGDGDTKMK 840 GDNEMDGDGG VIEHNQASSS AMTDPSSGSE SMMNGSSSSS RSRGARKHSK VEANFGDSGS 900 TITVKATYKE DTTRFKFEPS AGCFQLYEEV AKRFKLQTGT FQLKYLDDEE EWVMLVNDAD 960 LHECLEVLDF VGGRTIKFLV RDTPYAMGSS GSSNCFLASG S

Sequence ? help Back to Top

Protein Sequence Length: 1001 aa Download sequence

MERGVGFWAS PRSQMEGVVS FDAGARSSNV DDSFNNVMEI MNLDAYTGWC TSPSAAEQMF  60
ASYAASSQIN SVSQSYAPFE GLSYTEQNTG TFPPMDANMV GSTDCGGEKM MFGQNDEQLH  120
FVVDSTDGGG LVAKRSKNSS QQANDADISN SMIVRSPSQP LAERMLRALA MFKESSGAGI  180
LAQVWIPMKN KDQYVLSTCE QPYLLDQALS GYREVSRKFT FDAETKPGSI PGLPGRVFSS  240
RIPEWTSNVL YYKEAEYLRV QYAVSHEVRG SIALPVFEDD AYETPCCAVL ELVTMKEKPN  300
FDLEMDHVCR ALQVVNLRSI APPRLHSQSL SKNQRAALAE ITDVLRAVCH AHKLPLALTW  360
IPCSITEGEG DESIRVLARG CNASSNEKCV LCAEDTACYV SDKEMQGFVH ACMEHYLELG  420
EGIVGKALQS NHPFFYPDVK EYHISEYPLV HHARKFGLNA AVAIRLRSTF TGNDDYILEF  480
FLPISMKGST EQQLLLNNLS GTMQRICRSL RTVSDAELVG QGATFGLQDG FAPNLPPITL  540
SRRNSQHSLD SNSNSASVAP LGVSDSKNAG IQADGSREQT MIGSRRQMEK KRSTAEKHVS  600
LSVLQQYFSG SLKDAAKSIG VCPTTLKRIC RQHGISRWPS RKINKVNRSL KKIQTVLESV  660
QGVEGGLKFD PATGGLVPAS SIIQDFDAQQ SIFFPCKDVS VKNPSSVFQD AVSVPSTSGV  720
DKENSMVKME EDSYVDGNQL GQSNHINTSS FKGGNKSSIP VSGFCYEPKL AALDAMSSRP  780
ANQTMPLTNS RNASLGSFYT KEGCGRWGLD NDTLDNLECH FTSRCSYSKA AGGDGDTKMK  840
GDNEMDGDGG VIEHNQASSS AMTDPSSGSE SMMNGSSSSS RSRGARKHSK VEANFGDSGS  900
TITVKATYKE DTTRFKFEPS AGCFQLYEEV AKRFKLQTGT FQLKYLDDEE EWVMLVNDAD  960
LHECLEVLDF VGGRTIKFLV RDTPYAMGSS GSSNCFLASG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIS98353