PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98216
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 327aa    MW: 36108.5 Da    PI: 6.75
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98216genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.41.4e-09170217455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++sLq
  OIS98216 170 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 217
               8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGEMATGSSF TALLELPANQ AVELLVHSLE TDKTGEPHIP HYRYPPTPPP PPPIFPSDAA  60
LIDRASKFSV FAAAAGISPE SNSTLSNSGS KSLLVKEEPL DSEFNQNSSP IAVSNPTVNQ  120
KTTKRKEREK KVKETSSKKG KKSTNNTSED DAEKLPYVHV RARRGQATDS HSLAERARRE  180
KINARMKLLQ ELVPGCNKIS GTAMVLDEII NHVQSLQRQV EFLSMRLAAV NPSVDFNLDN  240
LFAPERSGSH VESNLPDMIV PPIWADGQTS GNRNQYQHLW HLEGFHQPVW GRVEDNSSFI  300
TPENSLLTYD SSANSASLHP NQLKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.24e-68bHLH family protein