PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIS98104

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 312aa MW: 35395.7 Da PI: 8.6038

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98104	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.4	5.1e-31	60	113	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWt++LH rFv+ave+LGG+e+AtPk +l+lm++kgL ++hvkSHLQ+YR+ OIS98104 60 VRLRWTTDLHLRFVQAVERLGGQERATPKLVLQLMNIKGLNIAHVKSHLQMYRS 113 59***************************************************7 PP
2	Myb_DNA-binding	53	8e-17	61	112	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt++++++v+av++lGg t+k++ + m+ kg+ ++ks++q+y+ OIS98104 61 RLRWTTDLHLRFVQAVERLGGQeraTPKLVLQLMNiKGLNIAHVKSHLQMYR 112 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MEDSDDTGCS RTSPNSDKDK EENDNTSIKL PKDGGSSSNS TVEESEKKLP VRPYVRSKMV 60 RLRWTTDLHL RFVQAVERLG GQERATPKLV LQLMNIKGLN IAHVKSHLQM YRSKKIDDPT 120 QGVANYRPFM EGGDPNIYNM SELPMLPTFI QRFNSTFRYG DAARNCPEST IDMNVTPEFY 180 TQLSERIFGS NYSRAIHQDS ITGIPSFISE RSTWRTNEMK DKMDKLTPLF QRAAKAKARL 240 SLLKRKAIDY DLIDLNLSLG VKQKNNSHHD DDDDDNGSTL SLSMSTSRLK EEANYATKEN 300 ARRGASTLDL TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-55	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIS98104