PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS97997 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Trihelix | ||||||||
Protein Properties | Length: 261aa MW: 31535.8 Da PI: 5.6732 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 82.8 | 4.5e-26 | 35 | 117 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ + +r em++++ ++k++k lWe ++ km+e+g++rs++qCk+kw+nl +ryk ++++e + +++++p++++l+ OIS97997 35 QWSIQETKDFLMIRGEMDQNFMETKRNKLLWEVIATKMKEKGYNRSAEQCKCKWKNLVTRYKGCETMEAEA---QRKQFPFYNELQ 117 7********************************************************************95...56689*****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MEGQPNLYHQ HQFVSQQNLL NIDTSGVGGG DRFPQWSIQE TKDFLMIRGE MDQNFMETKR 60 NKLLWEVIAT KMKEKGYNRS AEQCKCKWKN LVTRYKGCET MEAEAQRKQF PFYNELQAIF 120 MERMLRMEVE EEEYDEDSEE EKGCNKKKRK LKGKTSSSSS NVASGNLVGN LKEILDEFMN 180 KQMEMEMQWQ KEYERREEER KIKEMEWRQK MEALQNERLM MEKRWREREE QWKMREEARA 240 EKRDALITAL LNKLRSEDTS D |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 151 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 7e-52 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS97997 |