PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS97885 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 241aa MW: 27907.5 Da PI: 5.8666 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.1 | 4.1e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G +W+++++ g+ R++k+c++rw +yl OIS97885 14 RGPWTIEEDHKLMNFILNNGIQCWRLVPKLAGLMRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++ E++ +++++ qlG++ W++Ia++++ gRt++++k++w++ OIS97885 67 RGALSEAEEDMIIKLHSQLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110 78889*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGRQPCCEKI GLKRGPWTIE EDHKLMNFIL NNGIQCWRLV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAL SEAEEDMIIK LHSQLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKKLKLLG 120 LDPLTHKPIE QPDHHKNDDI KQNDSSEKEE INGKLELPET LPSVDFPQEQ KNIQNSTSSS 180 SLDEMNESNL EMGSNELFQN SDTLETFSSD MYNPGLEDPF QNWIGSPIHW NLFDNLDDNF 240 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 5e-80 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS97885 |