PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIS97819

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HB-other

Protein Properties

Length: 514aa MW: 58414.4 Da PI: 7.9663

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97819	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.5	4.6e-18	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q+e+Le+l+e+++yp+ e++++LA++ gLte+q++ WF+ rR k+k+ OIS97819 20 KKRIIKTRAQVEALEKLYEEHKYPTDEMKADLAESSGLTEKQISGWFCHRRLKDKR 75 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MEDLCEVHSE DDKGHPEKNK KRIIKTRAQV EALEKLYEEH KYPTDEMKAD LAESSGLTEK 60 QISGWFCHRR LKDKRLSNGE IYANARQDRS SGVIQDHGSG FRQDSCGSTK QADDKRFDHR 120 EVESRRLTGP EFSTADVTYE VGTHFRGKSN RMDDASSRSS SSLRNECFSH NAESYDIATS 180 RYISQNLPTD FKGVKPKNGP SGYLKVKGQV ENAAITAVKR QLGRHYRLDG PALGVEFDPL 240 PPGAFESSVP NPVNDPYYST EPVPDCSPDM SNVYRRSNGY GSNSKSNSHD SDLDGLRFKR 300 KANSALPEYH FNLKPKPNSS EHNEYPKRNS SFDTNEGSAR KIAVDSRDSC KFMPKHGRAE 360 IRASTGSSNG LRSPYVGKVN GEQLKPRFNS HSEVRLKAVE KEHFDRKPSD YKGINYHNFE 420 GRELPKIVEK DHISGKRTAV DENHDLVRVK VPRHNETRVV HRPMDEVPDH QEYLRRAPGL 480 EIPLQTNHRI RTAAEMRRSF SEDEETEETS SFED

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MEDLCEVHSE DDKGHPEKNK KRIIKTRAQV EALEKLYEEH KYPTDEMKAD LAESSGLTEK  60
QISGWFCHRR LKDKRLSNGE IYANARQDRS SGVIQDHGSG FRQDSCGSTK QADDKRFDHR  120
EVESRRLTGP EFSTADVTYE VGTHFRGKSN RMDDASSRSS SSLRNECFSH NAESYDIATS  180
RYISQNLPTD FKGVKPKNGP SGYLKVKGQV ENAAITAVKR QLGRHYRLDG PALGVEFDPL  240
PPGAFESSVP NPVNDPYYST EPVPDCSPDM SNVYRRSNGY GSNSKSNSHD SDLDGLRFKR  300
KANSALPEYH FNLKPKPNSS EHNEYPKRNS SFDTNEGSAR KIAVDSRDSC KFMPKHGRAE  360
IRASTGSSNG LRSPYVGKVN GEQLKPRFNS HSEVRLKAVE KEHFDRKPSD YKGINYHNFE  420
GRELPKIVEK DHISGKRTAV DENHDLVRVK VPRHNETRVV HRPMDEVPDH QEYLRRAPGL  480
EIPLQTNHRI RTAAEMRRSF SEDEETEETS SFED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	5e-68	HB-other family protein

Link Out ? help Back to Top
Ensembl	OIS97819