PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97775
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 645aa    MW: 70657.9 Da    PI: 4.6155
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97775genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1631.1e-50271551128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
               lp+G+rF+Ptdeelv++yL+ k++g + ++  vi+evdi+k+eP+dLp  + v++++++w+fF++ d+ky++g+r nrat++gyWkatgkd+++++kkg++
  OIS97775  27 LPVGYRFRPTDEELVNHYLRLKINGCDDKV-GVIREVDICKFEPSDLPdlSVVESKDNDWFFFCPIDRKYQNGQRLNRATERGYWKATGKDRNIVTKKGAK 126
               799************************999.99**************96448888999******************************************* PP

       NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
               +g+kktLv+y grap+g++t+Wv+heyr+
  OIS97775 127 IGMKKTLVYYIGRAPEGKRTNWVIHEYRA 155
               ***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 645 aa     Download sequence    
MAVIAGDNAI AGLPVGKHLG VPPLNTLPVG YRFRPTDEEL VNHYLRLKIN GCDDKVGVIR  60
EVDICKFEPS DLPDLSVVES KDNDWFFFCP IDRKYQNGQR LNRATERGYW KATGKDRNIV  120
TKKGAKIGMK KTLVYYIGRA PEGKRTNWVI HEYRATDKSL DGSHPGQGAF VLCRLFKKNE  180
LMQDENVESS HLDEVQQLVS SPAVGKSPDN EISDAVAPSP IMESDSDKSN PPKISGRETH  240
GTRLPIESRG DSCTVDDTED QMLDITSVPS DPELEKLLEI FCDTSPQHLD WKICSPLHAQ  300
LQVEFGSSYL HVPVINEMSH DQKDVQFQNG TNAFDINEFF NSVLDSSDEL SYEDSGLELR  360
TVQFASNSIN TITRSPVKDF GLCSESKAQV MQEPVGTDLF EPEVLWGNSA QTALMREVNS  420
VATTVEEAFA TPNVSNDHSM GNLDFLNNDY PGDAALPAGS GGMQVPYLLN VEDSSAYSTV  480
GSDSGFGTGI KLRTRLKQNQ PDDKQFGSGM QGTSHRRIRF QVKLQAGSVE CRVPIDSDKG  540
GANYKGLLTV SESDKFSIED GSSAGAAISS DKTQDTICKE FKGYGQVAED LSANVKDTDD  600
FPVDEASTTA ALSSFSSSFY ISKALVAVSV IIVFLGILGI CFKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.13e-84NAC family protein