PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIS97610 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 245aa MW: 27772.4 Da PI: 6.3663 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37 | 6.1e-12 | 69 | 115 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riNs +++Lr+ll + K +Ka+ L k+v+ +++L OIS97610 69 KNHKEAERRRRERINSHLDKLRTLLSCN-----SKTDKASLLAKVVQRVREL 115 78***********************997.....7************998887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MQQENMLENL DFCHHLTENR SNENMGEYGF DIPAIKSFCS SSFYSQAVKF QETVESITTP 60 EARAIAASKN HKEAERRRRE RINSHLDKLR TLLSCNSKTD KASLLAKVVQ RVRELKQQTS 120 EIMQLDETNF PSETDEITVL SSNDCLADGR LLIKASLCCE DRFDLIPDLI ETLKSLGLSP 180 LRAEMVTLGG RIRNVIVLAV DKDHSSDESL LFLRDALRSI IQPSSYGTGE RSKRRRVLDQ 240 GTSNY |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 75 | 80 | ERRRRE |
2 | 233 | 237 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G41130.1 | 9e-66 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIS97610 |