PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIS97170

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 393aa MW: 43810.2 Da PI: 5.8755

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97170	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.9e-08	336	369	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + OIS97170 336 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 369 469*****************************87 PP
2	ELK	28.9	2.5e-10	290	311	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ OIS97170 290 ELKHELKQGYKEKIVDIREEIL 311 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MAFQDHFSQE MATLHQQQQN AAVLRSMLPE DHQSPRKSPP TWLNTSLLRQ HSSAAAGGNG 60 NNFLHLQTSN SDSSNSNNQW LSPTAAASAG GGGGGGEEHN DVNTNNNSNS NNNNEEGENS 120 WEREKCKADI LNHPLYDQLL SAHVSCLRIA TPVDQLPRID AQLAQSQNVV AKYSVLGQGQ 180 PPLDDKDLDQ FMTHYVLLLS SFKEQLQQHV RVHAMEAVMA CWELEQSLQS LTGVAPGEGT 240 GATMSDDDDD QADSDTNFLD GGFDGSDSMG FGPLVPTESE RSLMERVRQE LKHELKQGYK 300 EKIVDIREEI LRKRRAGKLP GDTTSVLKAW WQSHSKWPYP TEEDKARLVQ ETGLQLKQIN 360 NWFINQRKRN WHSNPSTSTS QKSKRKSAGE IKQ

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MAFQDHFSQE MATLHQQQQN AAVLRSMLPE DHQSPRKSPP TWLNTSLLRQ HSSAAAGGNG  60
NNFLHLQTSN SDSSNSNNQW LSPTAAASAG GGGGGGEEHN DVNTNNNSNS NNNNEEGENS  120
WEREKCKADI LNHPLYDQLL SAHVSCLRIA TPVDQLPRID AQLAQSQNVV AKYSVLGQGQ  180
PPLDDKDLDQ FMTHYVLLLS SFKEQLQQHV RVHAMEAVMA CWELEQSLQS LTGVAPGEGT  240
GATMSDDDDD QADSDTNFLD GGFDGSDSMG FGPLVPTESE RSLMERVRQE LKHELKQGYK  300
EKIVDIREEI LRKRRAGKLP GDTTSVLKAW WQSHSKWPYP TEEDKARLVQ ETGLQLKQIN  360
NWFINQRKRN WHSNPSTSTS QKSKRKSAGE IKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-145	TALE family protein

Link Out ? help Back to Top
Ensembl	OIS97170