PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS96806
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 302aa    MW: 34784.5 Da    PI: 8.8721
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS96806genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.63.6e-51251552128
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.....kg 97 
                pGfrFhPtdeelv +yL++kve++++++ e ik++diyk++PwdLpk+ + ++kewyfF+kr +ky+++ r+nr+t sg+Wkatg d++++s+     ++
  OIS96806  25 LPGFRFHPTDEELVGFYLRRKVEKRPITI-ELIKQIDIYKYDPWDLPKSSNMGDKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSTvgegrRH 124
               69***************************.89***************988999****************************************98887666 PP

       NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
               e +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  OIS96806 125 ECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 155
               77***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEVENLSSTI VRFSNYTEEE EDVILPGFRF HPTDEELVGF YLRRKVEKRP ITIELIKQID  60
IYKYDPWDLP KSSNMGDKEW YFFCKRGRKY RNSIRPNRVT GSGFWKATGI DRPIYSTVGE  120
GRRHECIGLK KSLVYYRGSA GKGTKTDWMM HEFRLPAEND KSTKHIEAKS IAQEAEVWTL  180
CRIFKRNGSY RKCLPEWRSV AAAKRHPIDT SSKTCSADSS DYIISFGAPV MRPHNNITET  240
KPFSGPVHDI SNNSQLLMGQ LSPVRQAPPV SHTLASDMNE LLKHGDWDEL RSFLDLAVDP  300
LF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-93NAC family protein