![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIS96539 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 213aa MW: 23305.4 Da PI: 6.4769 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 136.2 | 1.2e-42 | 46 | 145 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+Ca++Cvlapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la++++e OIS96539 46 PCAACKILRRRCADKCVLAPYFPPNDPIKFTTAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQVNELQAQLAKAQAE 145 7**********************************************************************************************99976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 213 aa Download sequence |
MEYSSETKAT VISTSPSSSR SVSPPSSSSS SPNSPPPPPP MVVVSPCAAC KILRRRCADK 60 CVLAPYFPPN DPIKFTTAHR VFGASNIIKF LQELPESQRA DAVSSMVYEA NARLRDPVYG 120 CAGAICQLQK QVNELQAQLA KAQAEVVNMQ CQQANLMALI CMDMNQSSPQ ASPQQQSNLE 180 SFTNNIPHSF QNNMSFLDDN NNFGSVWEPL MWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07900.1 | 2e-62 | LBD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIS96539 |