PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS96460 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | CO-like | ||||||||
Protein Properties | Length: 412aa MW: 45354.5 Da PI: 5.5171 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.6 | 1.9e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ ++e++ + +C+++ +lC +C + H+ H++ OIS96460 4 ICEFCGEQRSIVYCRSDAACLCLSCDRNVHSAnalserHSR 44 7*****************************65777777776 PP | |||||||
2 | zf-B_box | 22.7 | 2e-07 | 46 | 78 | 4 | 36 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 +C++++++++ C + + lC++C ++H + OIS96460 46 LICERCNSQPAVVRCIEEKASLCQNCDWSGHAS 78 68*****************************65 PP | |||||||
3 | CCT | 58.6 | 2.1e-20 | 356 | 399 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a+lRY+eK+ktRkF+K++rY sRKa+A+ R RvKGrFvk+ OIS96460 356 RINAVLRYREKKKTRKFDKRVRYVSRKARADVRRRVKGRFVKAG 399 6689*************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MGYICEFCGE QRSIVYCRSD AACLCLSCDR NVHSANALSE RHSRTLICER CNSQPAVVRC 60 IEEKASLCQN CDWSGHASSS SSGSRHMRQA LSSYTGCPSA AELSNIWSFL LDDPSIGASC 120 EQRMGTMTIK DNRSRDVQGP QGKENSQNMR AAVEVNDMDI SEKSNLLVES SMPTLDNKQH 180 HVEPPIGSSN SALSKGGYMG AKGSSLFEED PYCDNLIMDA VDLSIENYEE LFGASLNYPD 240 ELFENENFDG LFEMKDIKSA DSNCRGANAA EGSPIARVNM VQPTCSNAES ADSAMSCKTD 300 SILYFARQSS LSFSNQTGES TAGDHQDCGV SPMLLIGEPP PWGPPCPEPS SPSTSRINAV 360 LRYREKKKTR KFDKRVRYVS RKARADVRRR VKGRFVKAGD AYDYDPLPTR SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48250.1 | 1e-109 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS96460 |