PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96353

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 498aa MW: 56068.1 Da PI: 5.8678

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96353	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.1	1.1e-15	89	179	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f+k +ps+v +l +pkkf+++h +k + t++l de+ +++ k+ ++k++ l++GW++F a+ L gD+++F+l++ +f +v ++r+ OIS96353 89 FVKFILPSHVAGGFWLGFPKKFCDRHL-PK-HDDTVVLVDEDEQEYATKYLVDKTG----LSGGWRGFSIAHSLLHGDVLIFQLIQPCKF--KVYIIRE 179 89999*******************4.33.3459***********888888....***********************98888..8888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MAISAMYSSK KSPLLSSSKK KALEIKKKLL RKRALGPSQT YKGEKGDNKK VQLCPEKKAN 60 KPRTVDANSS AMLRAEEVQA NLPSQFPSFV KFILPSHVAG GFWLGFPKKF CDRHLPKHDD 120 TVVLVDEDEQ EYATKYLVDK TGLSGGWRGF SIAHSLLHGD VLIFQLIQPC KFKVYIIRES 180 TLTELDGAIS LLNLDFHARP IKSDRIEDMK ICEAKEQKYL EPPVLDTHQD DKQEIDGAIS 240 LLKLDVRARP IISDPDEEMK ICEAKEEKYL EPSVIDIDQD DKNEETILVR NLDHGLASDQ 300 CGNDSDNSSE VLGIRFSESR LEFKDVKDFS GFNILVDGLI IDSEIPAHIW TKYYDLCCTQ 360 KSFLHDHLLG GLNCKLAAGM ITETVNIADA IRASNISTSC DYLETWDNTL KGFECLGMEV 420 GFLRARLNKL VSLSSESQQS LESKRNELAE AKEEMRNLES KLLKVKRVIK NIDSEIELTT 480 KDTSFELKFK AVAAAPWS

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MAISAMYSSK KSPLLSSSKK KALEIKKKLL RKRALGPSQT YKGEKGDNKK VQLCPEKKAN  60
KPRTVDANSS AMLRAEEVQA NLPSQFPSFV KFILPSHVAG GFWLGFPKKF CDRHLPKHDD  120
TVVLVDEDEQ EYATKYLVDK TGLSGGWRGF SIAHSLLHGD VLIFQLIQPC KFKVYIIRES  180
TLTELDGAIS LLNLDFHARP IKSDRIEDMK ICEAKEQKYL EPPVLDTHQD DKQEIDGAIS  240
LLKLDVRARP IISDPDEEMK ICEAKEEKYL EPSVIDIDQD DKNEETILVR NLDHGLASDQ  300
CGNDSDNSSE VLGIRFSESR LEFKDVKDFS GFNILVDGLI IDSEIPAHIW TKYYDLCCTQ  360
KSFLHDHLLG GLNCKLAAGM ITETVNIADA IRASNISTSC DYLETWDNTL KGFECLGMEV  420
GFLRARLNKL VSLSSESQQS LESKRNELAE AKEEMRNLES KLLKVKRVIK NIDSEIELTT  480
KDTSFELKFK AVAAAPWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	5e-39	B3 family protein

Link Out ? help Back to Top
Ensembl	OIS96353