PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS96200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 173aa MW: 19069.5 Da PI: 10.0829 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.2e-20 | 30 | 80 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GVr ++ +gr++AeIrd ++ + r +lg+f+taeeAa a+++a+++l+g OIS96200 30 SHFRGVRKRP-WGRYAAEIRDpWK----KSRRWLGTFDTAEEAALAYDEAARSLRG 80 78********.**********883....5999**********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MVAQSSTMCG GDGGGSQGNT SQPVRAPKES HFRGVRKRPW GRYAAEIRDP WKKSRRWLGT 60 FDTAEEAALA YDEAARSLRG PRAKTNFGLD GLAAVGPPPT LPKLPNWCFN ALYGSYLEDR 120 SRFGTGETTV ASSEYSGYKL QGVSVVLNEH EKKTKNEKKK PFLFDLNLPA PLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 2e-23 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS96200 |