PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96165

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 356aa MW: 42150.1 Da PI: 6.2977

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96165	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.7	8.3e-48	60	185	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 ppG+rF P+deel+ +yLkk+v +++l+ + ikev++yk+ P++L + ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk++++ ++ +vg OIS96165 60 PPGYRFCPHDEELIIHYLKKRVMNERLPH-DKIKEVNLYKYSPQELSeNYSMLGDKEWYFFTPRDRKYPNGNRPNRAAGTGYWKATGADKPIKH-NDIKVG 158 9************************99.88**********844444599***********************************.999* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k Lvfy+g+ pkg kt+W+mhe+r+ OIS96165 159 FRKALVFYEGKPPKGDKTNWIMHEFRV 185 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MEFDEQTKAH LKASQNPKIQ ELEKQKQVED EKGLIIVKPN YNIASEISRV NYVDDSFVFP 60 PGYRFCPHDE ELIIHYLKKR VMNERLPHDK IKEVNLYKYS PQELSENYSM LGDKEWYFFT 120 PRDRKYPNGN RPNRAAGTGY WKATGADKPI KHNDIKVGFR KALVFYEGKP PKGDKTNWIM 180 HEFRVNESRR LKRHAQDMRL DDWVLCRIYK KVDKSFKNAR KEQEQDDASI SCSSIGKMEN 240 CDYEGTTDSY EIVRQNLTLP HHYDITFDDP GFNMDYNRYS IDNFSHFGPR SNYGMPLQPS 300 FSPGNIFWDQ KGYQENCYLF PMHFDVNNFY QDSYDEIQSQ NILDSVLDEN SSIYND

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MEFDEQTKAH LKASQNPKIQ ELEKQKQVED EKGLIIVKPN YNIASEISRV NYVDDSFVFP  60
PGYRFCPHDE ELIIHYLKKR VMNERLPHDK IKEVNLYKYS PQELSENYSM LGDKEWYFFT  120
PRDRKYPNGN RPNRAAGTGY WKATGADKPI KHNDIKVGFR KALVFYEGKP PKGDKTNWIM  180
HEFRVNESRR LKRHAQDMRL DDWVLCRIYK KVDKSFKNAR KEQEQDDASI SCSSIGKMEN  240
CDYEGTTDSY EIVRQNLTLP HHYDITFDDP GFNMDYNRYS IDNFSHFGPR SNYGMPLQPS  300
FSPGNIFWDQ KGYQENCYLF PMHFDVNNFY QDSYDEIQSQ NILDSVLDEN SSIYND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-64	NAC family protein

Link Out ? help Back to Top
Ensembl	OIS96165