PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS96066

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 323aa MW: 37185.4 Da PI: 4.7795

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS96066	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.8	4.3e-09	266	300	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++++ LA+++gL+ +q+ +WF N+R ++ OIS96066 266 RWPYPTEADKNSLAESTGLDPKQINNWFINQRKRH 300 469*****************************885 PP
2	ELK	31.3	4.7e-11	220	241	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrK++++L+sLk EFs OIS96066 220 ELKDRLLRKFGSHLSSLKLEFS 241 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MDEEMYGFHP TSEYADKALM SPENLMMQTE YNMNYHNYNT LTTPPMMFGS DDVQLSSEAA 60 NSENNNNIHH QIRGSCSRRD DTEDDEDASN IIKAKIVSHP FYPKLLRAYI DCQKVGAPPE 120 IATVLEEIRQ QNDFRKANAT SICVGADPEL DEFMETYCDI LVKYKSDLSR PFDEATTFLS 180 KIELQLRNLC KDDGGVSSDE ELSCGEVEGQ DASHRSEDNE LKDRLLRKFG SHLSSLKLEF 240 SKKKKKGKLP KEARQILLAW WNDHYRWPYP TEADKNSLAE STGLDPKQIN NWFINQRKRH 300 WKPSENMQLA VMDNLSGQFF SDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-116	TALE family protein

Link Out ? help Back to Top
Ensembl	OIS96066