PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIS95927

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 181aa MW: 20827 Da PI: 6.273

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS95927	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	118	176	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YYrC+ +gCpvkk+ver++ed ++v++tYeg Hnh+ OIS95927 118 LDDGYKWRKYGKKMVKDSPNPRNYYRCSIEGCPVKKRVERDKEDCRYVITTYEGVHNHQ 176 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MYTMRIQSIT MAANNPSTNM SYGSFRSLDS PDSDFSNQLI NFELSDIFEL DNWPVHDDPT 60 SVVSDTSQYS NYAANEVVAT ERSRSYREGP SNNIGSSSER KEVKDKVAFK TLSQIEILDD 120 GYKWRKYGKK MVKDSPNPRN YYRCSIEGCP VKKRVERDKE DCRYVITTYE GVHNHQGPSQ 180 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	3e-41	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIS95927