PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95805
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 312aa    MW: 34780.1 Da    PI: 6.5764
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95805genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-14120166354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  OIS95805 120 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 166
               79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MQPQSFNINP VHFPSNSEMS QILPWTLPPV QPFNPVHHHV DPFLLPPAPS PYGGLFNRRV  60
PQFGYEGTTS SDHHLRFISD TLGHVVHHQP AGSAPFGLQA ELQKMTAQEI MDAKALAASK  120
SHSEAERRRR ERINNHLAKL RSLLPNTTKT DKASLLAEVI QHVKELKRQT SLIAETSPVP  180
TEIDELTVDT ASDEFEDGKF VIKASLCCED RSDLLPDLIK TLKALRLKTL KAEITTLGGR  240
VRNVLFITGD HNYNQEDDLS TSDDLDQQQQ QPQYSISSIQ EALKAVMEKS NGDDSASGSV  300
KRQRTNNINI LS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126131ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-82bHLH family protein