PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS95804
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 319aa    MW: 36772.6 Da    PI: 4.73
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS95804genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.71.9e-13141219291
      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
               fY+eYA+  GFsv+k++s+k+  +++    t++C +   r+++ ++          +  +Cka+l   ++++g w+v+k++++ nH+l p
  OIS95804 141 FYKEYAQLKGFSVVKRNSNKKG-SDTARYITYCCDRARIRKTKFTT----------KSNNCKARLATVLDDSGCWRVSKVVHDRNHDLLP 219
               9****************99985.5558999*******999987666..........7789***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDSNQENWAV QQNMNPNEHN TNTMSMNINQ NNRFDRVRDE LYRSLGMTSD DSFLNEYEWV  60
DVDSHGSFNN VVHLDDDGDD DEEPDGEYHG EANDDEEQVL GNELELCDVD REMENEFTEE  120
DMVVGPISGL RFRDKDSLFA FYKEYAQLKG FSVVKRNSNK KGSDTARYIT YCCDRARIRK  180
TKFTTKSNNC KARLATVLDD SGCWRVSKVV HDRNHDLLPS ISRLMAGHRS VCDSLKRDIV  240
AHDRSGIKPS KNIKLAEVQR GGPQNLVCTP KDCRNFILKS RNFEMPEGDA QSLLNFFREM  300
QVKDSEFFYS VDVDNIGRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-19FAR1 family protein