PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS95785

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 445aa MW: 48779.4 Da PI: 5.0702

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS95785	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.5	7.6e-11	382	427	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L A +YIk+L+ OIS95785 382 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDFAADYIKELE 427 689*******************7....688*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MDHRSHQQQQ MTSGLTRYRS APSSYFSSLL SSNNPAAVAG GGENCGYARD DFDQLLNSRA 60 SNTDIKQVFD RFVANIDPQD MNSKGLIGDT QQNHMSNMNV RSEVVAPTKL EHEQSQAQQS 120 QNSQFVAAVK QETQQNSDYS LASQMNYQTQ AQQNDNSDLT SAMDNFARFL GAADSNRLNQ 180 TKMDGGFGAG SSNSNLTRFN SSPAGFFAQF DIENEYGAMR GIGGYGAGGN AAAEASFPTP 240 NRFSSQTALQ SGQPPSSGLL APISDFGARS IEEGRAGDES FGKGHKNDES YMTGFPIPSW 300 DDSQMLTDDF LQVPEDNEAE PFSNVNASDN QNSEGRTRPP TLLSHLSLPQ TSAELSAMEK 360 LLQDSVPCKV RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT NTADMLDFAA 420 DYIKELETQV KALSERRSKC TCSNK

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MDHRSHQQQQ MTSGLTRYRS APSSYFSSLL SSNNPAAVAG GGENCGYARD DFDQLLNSRA  60
SNTDIKQVFD RFVANIDPQD MNSKGLIGDT QQNHMSNMNV RSEVVAPTKL EHEQSQAQQS  120
QNSQFVAAVK QETQQNSDYS LASQMNYQTQ AQQNDNSDLT SAMDNFARFL GAADSNRLNQ  180
TKMDGGFGAG SSNSNLTRFN SSPAGFFAQF DIENEYGAMR GIGGYGAGGN AAAEASFPTP  240
NRFSSQTALQ SGQPPSSGLL APISDFGARS IEEGRAGDES FGKGHKNDES YMTGFPIPSW  300
DDSQMLTDDF LQVPEDNEAE PFSNVNASDN QNSEGRTRPP TLLSHLSLPQ TSAELSAMEK  360
LLQDSVPCKV RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT NTADMLDFAA  420
DYIKELETQV KALSERRSKC TCSNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	1e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIS95785