PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIS95762 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 271aa MW: 31808 Da PI: 6.7852 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll++++ G g+W++ a++ g++Rt+k+c++rw++yl OIS95762 23 RGPWTLEEDNLLIHYISTNGEGRWNALAKCAGLKRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.7e-17 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ OIS95762 76 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MSKNIVIMSN NSSNEDDQFE LRRGPWTLEE DNLLIHYIST NGEGRWNALA KCAGLKRTGK 60 SCRLRWLNYL KPDIKRGNLT PQEQLLILEL HSKWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKQARQLKV DCNSKKFVEA IKSLWMPRLL EKMEQSSSIE KHNPSLITPL INNQEPYDKE 180 NSRMYSTDSM NMLKLQPNEM TKDVTIYNNS VQNECYHVES LSQQPDFSSQ EMSISECEVA 240 EAHWFSDEMA AASLWNMDEF WQFRKLGDID I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 1e-90 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIS95762 |