PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM12G01380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | WRKY | ||||||||
Protein Properties | Length: 168aa MW: 18631.7 Da PI: 7.947 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.4 | 4.2e-11 | 10 | 52 | 21 | 59 |
-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 ++ YYrCt++ +Cp++k+v+++ ++dp ++ +tY ++H+++ OGLUM12G01380.1 10 TKFYYRCTYKndmKCPATKQVQQKdTNDPPLFSVTYFNHHTCN 52 577******99999*******8761679*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MQDSAGFGVT KFYYRCTYKN DMKCPATKQV QQKDTNDPPL FSVTYFNHHT CNSSPKIVGS 60 TPDSTVQSRK AISICFNSHG KTGELPTFLS PSASLLSPSM QPYSSNQQPD MNTYSRQFHW 120 ADTSSSTSYA PVKMEADDYA EASASPSTTG ALSRTLLPID YRYFFVVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 2e-10 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM12G01380.1 |