PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM11G14240.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 665aa MW: 73591.9 Da PI: 8.5505

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM11G14240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.5	2.4e-31	33	161	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +G+ F+Pt+ elvv+yL +++ +++l++ ++i++vdi ++Pwd+ ++++ +fF++++++++++ ++n a+ +g+W+ g++ ++++k OGLUM11G14240.1 33 SVGCVFRPTEGELVVNYLYRRAMQEPLPC-DFITDVDIQCHNPWDIV--PGEKKNGKHFFTRKENSHPRDYESNHAAGDGFWRLAGTEVPIYNK 123 68*************************.99**********5..34566799********************************* PP NAM 96 .....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+k+tLvf+ +++++e+t Wvm+e+rl OGLUM11G14240.1 124 psggaDEKLVGMKRTLVFHFRKSSSTERTGWVMQEFRL 161 999988889******9999***********98 PP
2	NAM	97.8	1.6e-30	403	528	8	128
NAM 8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 hPt+ elv +yL +++ + +l e+i +v+i++++Pwd+ +++++ek yfF++++ k ++++r+nr+t++g+W++ g++k+v+ + + OGLUM11G14240.1 403 HPTEGELVFHYLYRRAVNMPLLS-EFICDVNILRHNPWDIVpGALTEREKGKYFFMQKEIKCPSSRRSNRITSKGFWRSAGSEKPVYYNqgG-- 493 9*****************777.89**********54788889999********************************98551.. PP NAM 99 l.....vglkktLvfykgrapkgektdWvmheyrl 128 vg+++tL+fy g+++++e+t+W m+e+rl OGLUM11G14240.1 494 GsdcmlVGMRRTLTFYFGNSRTAERTKWGMQEFRL 528 234566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MRRICPRFKI NGRTMAGPGV CINLLNGTTM HLSVGCVFRP TEGELVVNYL YRRAMQEPLP 60 CDFITDVDIQ CHNPWDIVPG EKKNGKHFFT RKENSHPRDY ESNHAAGDGF WRLAGTEVPI 120 YNKPSGGADE KLVGMKRTLV FHFRKSSSTE RTGWVMQEFR LAGASLVPCL VMRPATGDVS 180 MPPCGCTETT TTKKNNGSPS AAHTHAPLVE TMVEPDNSWM ICRIYKKRQR APQVIIPPSI 240 GNAREAVLAV PAIGNAGDRQ VNFIDFPGHR CFEEGSDESA NVITKDKGSD ARQEKKNGKH 300 FFTCKEKKHH GNNCRNHAAG VGFWRLASTE ALEVFICREH GMSNARVPTS WFLPLALLCD 360 ATISPSFEEG SSESVNVTDN VKDGGGHCMN GATMHLPAVG MSHPTEGELV FHYLYRRAVN 420 MPLLSEFICD VNILRHNPWD IVPGALTERE KGKYFFMQKE IKCPSSRRSN RITSKGFWRS 480 AGSEKPVYYN QGGGSDCMLV GMRRTLTFYF GNSRTAERTK WGMQEFRLAG NGLSPYPAMK 540 HATGDGSKPP CNCAETTIAK RNDGLSAVLR NVLAVTPLVE TVVEPDGSWL ICRIYRTRQR 600 ALPVITPPAI ENAREIIIPP ANGNAREAQV RFIDFLRQGS HCSCIVGPSL AEGSDESAGS 660 VDQKD

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MRRICPRFKI NGRTMAGPGV CINLLNGTTM HLSVGCVFRP TEGELVVNYL YRRAMQEPLP  60
CDFITDVDIQ CHNPWDIVPG EKKNGKHFFT RKENSHPRDY ESNHAAGDGF WRLAGTEVPI  120
YNKPSGGADE KLVGMKRTLV FHFRKSSSTE RTGWVMQEFR LAGASLVPCL VMRPATGDVS  180
MPPCGCTETT TTKKNNGSPS AAHTHAPLVE TMVEPDNSWM ICRIYKKRQR APQVIIPPSI  240
GNAREAVLAV PAIGNAGDRQ VNFIDFPGHR CFEEGSDESA NVITKDKGSD ARQEKKNGKH  300
FFTCKEKKHH GNNCRNHAAG VGFWRLASTE ALEVFICREH GMSNARVPTS WFLPLALLCD  360
ATISPSFEEG SSESVNVTDN VKDGGGHCMN GATMHLPAVG MSHPTEGELV FHYLYRRAVN  420
MPLLSEFICD VNILRHNPWD IVPGALTERE KGKYFFMQKE IKCPSSRRSN RITSKGFWRS  480
AGSEKPVYYN QGGGSDCMLV GMRRTLTFYF GNSRTAERTK WGMQEFRLAG NGLSPYPAMK  540
HATGDGSKPP CNCAETTIAK RNDGLSAVLR NVLAVTPLVE TVVEPDGSWL ICRIYRTRQR  600
ALPVITPPAI ENAREIIIPP ANGNAREAQV RFIDFLRQGS HCSCIVGPSL AEGSDESAGS  660
VDQKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	7e-26	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM11G14240.1