PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM11G13920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | GRAS | ||||||||
Protein Properties | Length: 113aa MW: 13338.2 Da PI: 9.1237 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 58.3 | 1.6e-18 | 1 | 102 | 239 | 361 |
GRAS 239 vvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332 +vv+eqea+hn++ ++erf+eal+yy+ s e + vEr llg+ei+n+ + he+le+W +rle aGF+ +pls++ OGLUM11G13920.1 1 MVVTEQEASHNAALLAERFVEALNYYAR-----------GSVEHTRVERWLLGEEIMNI------W----HERLERWVRRLEGAGFGRIPLSYY 73 79************************74...........4567779************8......4....89999******************* PP GRAS 333 aakqaklllrkvksdgyrveeesgslvlg 361 a qa+++ + + dg++v ee+g ++l OGLUM11G13920.1 74 ALLQARRVAQGLGCDGFKVREEKGNFFLF 102 ************************99873 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MVVTEQEASH NAALLAERFV EALNYYARGS VEHTRVERWL LGEEIMNIWH ERLERWVRRL 60 EGAGFGRIPL SYYALLQARR VAQGLGCDGF KVREEKGNFF LFFVSTWRGR RFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 1e-31 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM11G13920.1 |