PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G05010.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 329aa    MW: 35594.9 Da    PI: 5.4489
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G05010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.76.7e-5191331128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtd+elv++yL++k+ g +l +  vi+evd+yk++PwdLp+++ ++ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+v s
  OGLUM11G05010.1   9 LPPGFRFHPTDDELVMYYLCRKCGGLPLAA-PVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGS 101
                      79*************************999.89***************8888999*************************************99 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++v +kk Lvfy g+ pkg+kt+W+mheyrl
  OGLUM11G05010.1 102 --PRAVAIKKALVFYAGKPPKGVKTNWIMHEYRL 133
                      ..678***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MECGGALQLP PGFRFHPTDD ELVMYYLCRK CGGLPLAAPV IAEVDLYKFN PWDLPERAMG  60
GEKEWYFFSP RDRKYPNGQR PNRAAGTGYW KATGADKPVG SPRAVAIKKA LVFYAGKPPK  120
GVKTNWIMHE YRLADVDRSA AARKLSKSSH NALRLDDWVL CRIYNKKGVI ERYDTVDAVE  180
DVKPATAAAA AAAKGGRIGG GAAAMKVELS DYGFYDQEPE SEMLCFDRSG SADRDSMPRL  240
HTDSSGSEHV LSPSPSPDDF PGGGDHDYAE SQPSGGCGGW PGVDWAAVGD DGFVIDSSLF  300
ELPSPAAFSR GGGDGAAFGD MFTYLQKPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195201GGRIGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.15e-92NAC family protein