PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G02610.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 447aa    MW: 50269.9 Da    PI: 4.3667
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G02610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.77e-30331681128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyat.gkrknra.....tksgyWkatg 87 
                      lppG++F Ptdeelv++yL+ k+eg++ +  ++i+e +i++++P++L +k+k+ +e++wyfF+ r+ ++++ ++++nr+     +++g W+atg
  OGLUM11G02610.1  33 LPPGYHFVPTDEELVDFYLRGKIEGRDPPR-RFISEENIMRYDPQKLIEKYKGyGEDRWYFFMVREPSKTKkKDEPNRKvvvdgVEEGSWSATG 125
                      79*************************998.89**************8655553777*****9998776642779999656666679******* PP

              NAM  88 kdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  +++s+    +++ +g k++L++   +a+++e+  W mhey l
  OGLUM11G02610.1 126 SVVQIHSTketnRKAIIGSKRVLTYK--SARSAENDMWSMHEYVL 168
                      ******9866655666*********9..5666669********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MENGGSGGDG SAAAAAAEGS AIWKSELVPQ LQLPPGYHFV PTDEELVDFY LRGKIEGRDP  60
PRRFISEENI MRYDPQKLIE KYKGYGEDRW YFFMVREPSK TKKKDEPNRK VVVDGVEEGS  120
WSATGSVVQI HSTKETNRKA IIGSKRVLTY KSARSAENDM WSMHEYVLAG KSQMGQYVLC  180
AIQLKQTYER EEKAREEQKN DNKRNKKAAR RKNMQQQPTA CQAQDEQQET APTPGEETIV  240
DPDQFMDIAH SMHMMFGGVD QDAPPFMPSL IAPCNNDDGM LQLQPLQLQN PNPAMLYSNQ  300
LEPSYVGDQS MFTPCFCDRN CISCRQLQFY QQQQAEDGSV AFGEADLYQQ HDRALGNTGV  360
YPDNVWVDGN MADYAQRQIY NDQDNGGVLM QGPEDSATFP DNFLMLDEMA AGSDDASGFD  420
YEVDQSMALV PHVADQTVDD IMSSLLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-22NAC family protein