PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM11G02260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | GRAS | ||||||||
Protein Properties | Length: 195aa MW: 21383.8 Da PI: 9.3842 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 39.7 | 7.2e-13 | 1 | 56 | 319 | 374 |
GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +e+aGF+ vpls+ a + + ++r+++ + + +e g+l+l+W++rpL+s+SaWr OGLUM11G02260.1 1 MEMAGFTGVPLSYAAIRKGNDMVRRCGLRRCENKECGGCLLLCWSSRPLYSISAWR 56 89*************************887999999*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MEMAGFTGVP LSYAAIRKGN DMVRRCGLRR CENKECGGCL LLCWSSRPLY SISAWRPAAS 60 RGAGSGSERS ELINLYKRQR VLDLQLCGEE RFERMVGAHG TGARLPPIDE QVISMKLVTP 120 AKGTIELSRE KDPDLFYLAR CGLGGLGVVA EPSQSIFPIN PTTAHFHQIS LPIAVPRKPS 180 NLKHNLVPVG VLNRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 4e-13 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM11G02260.1 |