PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM11G02250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 76aa MW: 8782.79 Da PI: 8.2452 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 24.9 | 2.3e-08 | 2 | 43 | 336 | 374 |
GRAS 336 qaklllrkvksdg.yrveee..sgslvlgWkdrpLvsvSaWr 374 +a+ ll+ +++ g y+v ++ + ++++W++rpL++v+aWr OGLUM11G02250.1 2 EARKLLQSCGWAGpYEVRHDagGHGFFFCWHKRPLYAVTAWR 43 6999******8888****884345678**************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 76 aa Download sequence |
MEARKLLQSC GWAGPYEVRH DAGGHGFFFC WHKRPLYAVT AWRPAASRRG HTRSTKEISA 60 DNEQQMNDTY IQETID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G50420.1 | 2e-09 | GRAS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM11G02250.1 |