PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM11G01310.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 409aa MW: 45380 Da PI: 7.0084

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM11G01310.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.2	5.7e-52	11	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+v+yL +++++ k+++ +i+ev+iyk++PwdLp k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++ls OGLUM11G01310.2 11 LPPGFRFHPTDEELIVHYLMNQAASVKCPV-PIIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKSILS 103 79**************************.88***********8777899**********************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ ++g+kk Lvfykg+ pkg+ktdW+mheyrl OGLUM11G01310.2 104 TpTSDNIGVKKALVFYKGKPPKGVKTDWIMHEYRL 138 988899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MPSSGGAMPA LPPGFRFHPT DEELIVHYLM NQAASVKCPV PIIAEVNIYK CNPWDLPGKA 60 LFGENEWYFF SPRDRKYPNG ARPNRAAGSG YWKATGTDKS ILSTPTSDNI GVKKALVFYK 120 GKPPKGVKTD WIMHEYRLTG TSANSTKQRR ASSMTMRKRV KVCTLLIIVY CICDIVHQLD 180 DWVLCRIHKK SNDFNSSDQH DQEPEGSTVE QLEDIHDNNS SEAPAPADMN NQQSDFQPMT 240 AMMSMSKSCS LTDLLNTIDC AALSQFLLDG SSDAIAEPPA PPSPLIYTTP HPNYQTLNYN 300 INSNSSMPHA FESRLDHHDG YVNNYNVNGL RRKRMMACSA TSFDDGSSSN DFVHAVVKKP 360 QLLPSDSRGS GFGGGYCNQQ LSETATGFQF QNGNLLSHPF PLNNHLQMQ

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MPSSGGAMPA LPPGFRFHPT DEELIVHYLM NQAASVKCPV PIIAEVNIYK CNPWDLPGKA  60
LFGENEWYFF SPRDRKYPNG ARPNRAAGSG YWKATGTDKS ILSTPTSDNI GVKKALVFYK  120
GKPPKGVKTD WIMHEYRLTG TSANSTKQRR ASSMTMRKRV KVCTLLIIVY CICDIVHQLD  180
DWVLCRIHKK SNDFNSSDQH DQEPEGSTVE QLEDIHDNNS SEAPAPADMN NQQSDFQPMT  240
AMMSMSKSCS LTDLLNTIDC AALSQFLLDG SSDAIAEPPA PPSPLIYTTP HPNYQTLNYN  300
INSNSSMPHA FESRLDHHDG YVNNYNVNGL RRKRMMACSA TSFDDGSSSN DFVHAVVKKP  360
QLLPSDSRGS GFGGGYCNQQ LSETATGFQF QNGNLLSHPF PLNNHLQMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	2e-78	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM11G01310.2