PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G14340.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 275aa MW: 27881.2 Da PI: 8.4778

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G14340.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	104.2	7.7e-33	105	161	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++cprC s+ntkfCyynnys +qPry+CkaCrr+Wt+GG+lr+vPvGggr+++k++ OGLUM10G14340.1 105 PRQCPRCGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNSKRA 161 679***********************************************9998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MSSPFLGSSS SSASSPLSYL TPPRPPSPPP PPPLLMVRHG LARWLTDLDD ELMVFDDDLG 60 VQGQGYAAAA NGGIGGGGVE AVNAAAAPRQ GGRHAGHPPL PRPPPRQCPR CGSANTKFCY 120 YNNYSRTQPR YLCKACRRHW TEGGTLRDVP VGGGRKNSKR AAGGGKAGAT ASTAASAHVV 180 APAAAPPTSS SFPDLLRQML MAPATAGGGG GYSIDLTAWQ QMAAFAAPPQ AATGDVGGAV 240 GATSTAAPDA NCGGGGVQYW NGWLQDDMPG LDGSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.2	1e-17	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G14340.1