PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM10G13040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 324aa MW: 35623 Da PI: 5.6091 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160.8 | 5.3e-50 | 11 | 139 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrF P+deelv++yL++kv+++++ ++ +vd++ ePw+Lp+ +k + +ewyfFs rd+kyatg+r+nratk+gyWkatgkd+ v++ OGLUM10G13040.1 11 LPPGFRFCPSDEELVCFYLRNKVANHRVAS-GTLVDVDLHAREPWELPEVAKLTAEEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDRIVHE 103 79*************************888.88***************87788899**********************************9999 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++++vg++ktLvfy grap+g+kt+Wvmhe+rle OGLUM10G13040.1 104 GtTRAVVGMRKTLVFYLGRAPNGQKTTWVMHEFRLE 139 766778***************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 324 aa Download sequence |
MAGLREMEST LPPGFRFCPS DEELVCFYLR NKVANHRVAS GTLVDVDLHA REPWELPEVA 60 KLTAEEWYFF SFRDRKYATG SRTNRATKTG YWKATGKDRI VHEGTTRAVV GMRKTLVFYL 120 GRAPNGQKTT WVMHEFRLET PNSQPKEDWV LCRVFDKKKP STIEAEGGGS SGSDLFIPGA 180 TDGSTDPSSP TTMAPLLGSS PDPTVVDRFD HRSAAVPPLM VLMQGGGDQM ISGSGVHCSN 240 NDNSGSSSAL LNLTMLQYSF LEHRPTGDDM AVGAHFGTCQ GGNNDATMAL GMGFEEHGMG 300 EIIEMEPAWR QGGSNCVYRD ELYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G28530.1 | 1e-76 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM10G13040.1 |