PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G08720.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 311aa    MW: 32904.1 Da    PI: 5.9362
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G08720.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.55e-1025676125
              NAM  76 ratksgyWkatgkdkevlsk..kgelvglkktLvfy...kgrapkgektdWvmhe 125
                      r+++ g+Wka+ ++k+v sk  +g +vg k t+vfy    + ++++ kt+W mhe
  OGLUM10G08720.2   2 RVADGGTWKASDESKTVRSKkvGGIDVGQKFTMVFYerrFEGDQNPIKTNWGMHE 56 
                      78899*************99888899**********43313456678*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MRVADGGTWK ASDESKTVRS KKVGGIDVGQ KFTMVFYERR FEGDQNPIKT NWGMHERKED  60
TEPVNAAATV SSTDEPSTPA ALPLPTPPPR PLPDMAGSSS ATSLLPLQLP GLAGSSSTMP  120
LALPLQLPGL PRSSSVMSLP GLAGEMTSMG HGETGEHGLD ASTPSSELPQ DWYDEYEVAY  180
GAVAPPAPST IIWAALPSSP TAWWPPSNGG PMQHDGYLGM ADPASYTLEH LLPTAAIPPE  240
PMAPPKSSPA PPPAVGHHRL SPPHDAAGNY DHLELANYGG VRRSTSIIII IHRSLRMART  300
ATVPWPTATH S