PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G08700.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 532aa MW: 57396.1 Da PI: 4.6798

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G08700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.6	3.3e-25	36	172	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkya..tgkrknratksgyWkatgkd 89 +p+G F P+d el +k v+g+ l++v+++++i++++P L+ + + +ee+ +yfFskr+ +++ +++r++r+tk g+Wka+g + OGLUM10G08700.1 36 MPVGWYFVPKDLELFAILRCKLVRGQLpGALNNVFEHIRILEIHPALLHeTYIGNEEDgYIYFFSKRQFTTKagNKRRPTRVTKGGMWKASGGS 129 699**********7766666666653334566999*******84455555553569986555337889************ PP NAM 90 kevlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127 k++ sk +g +vg k t+vfy + ++++ kt+W mhe++ OGLUM10G08700.1 130 KTLRSKkvGGIDVGQKLTMVFYerrFEGDRNPIKTNWGMHEFT 172 998888899*******43312456678******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MAEQPPEGRG GGDNNNGKRK GKEKVVPEYG KNRHGMPVGW YFVPKDLELF AILRCKLVRG 60 QLPGALNNVF EHIRILEIHP ALLHETYIGN EEDGYIYFFS KRQFTTKAGN KRRPTRVTKG 120 GMWKASGGSK TLRSKKVGGI DVGQKLTMVF YERRFEGDRN PIKTNWGMHE FTKIIDGTKN 180 QLEDLAVYRL YKIKRKEDEE PSNTAAAASS TDEPSTSSAL PPPTPPRPLP DMAGPSSATP 240 LLPLQLPGLA GSSSAMSLPA LQLPGMAGSS SAMPLPPLSL PGLAGGMMSM ADQANMASTS 300 QVSTPSSELL QDWYDEFEIT YGAVAPPSPS TISWVAPQSS PTGWWPSPNG GPVQHDGYLG 360 MAADPTSYML ENLLPTAAIP PEPMMPPTSS PAPPPAVDHH HRLSPPHDAA GSNYNYPELA 420 DYNGGVQAQH EHQYHPQEPQ ASLVDAEDGY SAMAGGDDAQ LGGAELDTER IAEMVNHIMD 480 GEFEFKFEDN TVLKYNEVFP DNDEVVAAPM MIDGGGDGDG ANGGDGDDPF DN

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MAEQPPEGRG GGDNNNGKRK GKEKVVPEYG KNRHGMPVGW YFVPKDLELF AILRCKLVRG  60
QLPGALNNVF EHIRILEIHP ALLHETYIGN EEDGYIYFFS KRQFTTKAGN KRRPTRVTKG  120
GMWKASGGSK TLRSKKVGGI DVGQKLTMVF YERRFEGDRN PIKTNWGMHE FTKIIDGTKN  180
QLEDLAVYRL YKIKRKEDEE PSNTAAAASS TDEPSTSSAL PPPTPPRPLP DMAGPSSATP  240
LLPLQLPGLA GSSSAMSLPA LQLPGMAGSS SAMPLPPLSL PGLAGGMMSM ADQANMASTS  300
QVSTPSSELL QDWYDEFEIT YGAVAPPSPS TISWVAPQSS PTGWWPSPNG GPVQHDGYLG  360
MAADPTSYML ENLLPTAAIP PEPMMPPTSS PAPPPAVDHH HRLSPPHDAA GSNYNYPELA  420
DYNGGVQAQH EHQYHPQEPQ ASLVDAEDGY SAMAGGDDAQ LGGAELDTER IAEMVNHIMD  480
GEFEFKFEDN TVLKYNEVFP DNDEVVAAPM MIDGGGDGDG ANGGDGDDPF DN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	7e-13	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G08700.1