PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM10G07890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 303aa MW: 32707.8 Da PI: 4.8565 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.1 | 7.4e-19 | 63 | 116 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ +eq+++Le+ Fe +++++ e+++++A+ l+L rqV vWFqNrRa++k OGLUM10G07890.1 63 KKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWK 116 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 125.8 | 2e-40 | 62 | 154 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl++eqv++LE+sFe+++kL+perK+++ar+L+l+prqvavWFqnrRAR+ktkq+E+d++aL++++dal+ e ++L++++++L++e+++ OGLUM10G07890.1 62 EKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIAD 154 69**************************************************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MKRPSCRGSS MAIIHDTSDQ QEDNMRSYMD GGGAAAYEEE EEEVEDDDGG GGGGGGGGGL 60 GEKKRRLAAE QVRALERSFE ADNKLDPERK ARIARDLRLH PRQVAVWFQN RRARWKTKQI 120 ERDFAALRSR HDALRLECDA LRRDKDALAA EIADLRDRVD GQMSVKLEAV AMDEHQPPPP 180 PPPPPLAYNN KVVDGSTDSD SSAVFNEEAS PYSGAAIDHH HHQTPASYDT AGFTSFFAPS 240 TTLTSSLSFP SMFHASSHFD GHQELLVGGG GAGAVADADL GGAGFFAGDE HAGGLSWYGA 300 EGW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 119 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G40060.1 | 7e-33 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM10G07890.1 |