PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G07770.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 1052aa MW: 117516 Da PI: 5.9809

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G07770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.6	3.9e-56	25	142	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 lke ++rwl++ ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een++f OGLUM10G07770.1 25 LKEaQQRWLRPAEICEILKNYKSFRIAPEPPNRPQSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENENF 118 45559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhyle+k OGLUM10G07770.1 119 QRRTYWMLEEDFMHIVLVHYLETK 142 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1052 aa Download sequence
MAADARRFAV VPQLGEHNAD IAQILKEAQQ RWLRPAEICE ILKNYKSFRI APEPPNRPQS 60 GSLFLFDRKV LRYFRKDGHN WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENENFQR 120 RTYWMLEEDF MHIVLVHYLE TKKSLNPHCI VLCDYELQGG KSRTRGNNDM HQAAVMDSPL 180 SQLPSQTIDG ESSLSGQFSE YEEAESGGTG YHSFTQMQQQ QNGIGPVTDA SMFSSRVSAS 240 SIGNYQGQHA MGHTTNFYSS SQHDSPLVLS DPNLELENNG HESLWNGVMK PDEGTVQMTH 300 LQPPVHPEQG MFTTEGQGVE YLTFDEVYSD GLSLKDIGAA GADVEPFWQF SSNSYLTEAI 360 AFQLSSATAD ISATENSVQQ NDGSLGAAIG FPFLKTQSSN LSDILKDSFK KSDSFTRWMS 420 KELLDVEDSQ IQSSSGAYWN TEEADSIIEA SSREPLDQFT VAPMVLQDQL FSIVDFSPSW 480 TYAGSKTKVL VTGRFLHANE VTERCKWSCM FGEVEIQAEI SADGTLRCYS PPHKPGRVPF 540 YVTCSNRLAC SEVREFEFRP SDSQYMDAPS PLGATNKVYF QIRLDNLLSL GPDVYQATIT 600 NPSKEMIDLS KKISSLLANN DEWSKLLKLA DDNEPLSHDQ QDQYAENLIK EKLHVWLLHK 660 VGNGGKGPSV LDDEGLGVLH LAAALGYDWA IRPTVTAGVN INFRDFHGWT ALHWAAFCGR 720 ERTVVALIAL GAAPGALTDP HPNYPAESTP ADLASANGHK GISGFLAESS LTSHLQALNL 780 KEANMSEISG LPGIGDITER NASQPAIGDS LGAVRNAAQA AARIYQVFRV QSFQRKQAVQ 840 YEGDKGGISD EHTLSLLSMK PSKSGQLDPL HAAASRIQNK YRGWKGRKEF LLFRQRIVKI 900 QAHVRGHQVR KHYRKIVWSV GIVEKVILRW RRRRAGLRGF RPTEGAIESS SGGTSSNLVT 960 DKPAGDDYDF LQEGRKQTEE RLQKALARVK SMVQYPEARD QYQRILNVVS KMQESQTVQE 1020 KILDESTEMD EGDFMSEFKE LWDDDTPLPG YF

Sequence ? help Back to Top

Protein Sequence Length: 1052 aa Download sequence

MAADARRFAV VPQLGEHNAD IAQILKEAQQ RWLRPAEICE ILKNYKSFRI APEPPNRPQS  60
GSLFLFDRKV LRYFRKDGHN WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENENFQR  120
RTYWMLEEDF MHIVLVHYLE TKKSLNPHCI VLCDYELQGG KSRTRGNNDM HQAAVMDSPL  180
SQLPSQTIDG ESSLSGQFSE YEEAESGGTG YHSFTQMQQQ QNGIGPVTDA SMFSSRVSAS  240
SIGNYQGQHA MGHTTNFYSS SQHDSPLVLS DPNLELENNG HESLWNGVMK PDEGTVQMTH  300
LQPPVHPEQG MFTTEGQGVE YLTFDEVYSD GLSLKDIGAA GADVEPFWQF SSNSYLTEAI  360
AFQLSSATAD ISATENSVQQ NDGSLGAAIG FPFLKTQSSN LSDILKDSFK KSDSFTRWMS  420
KELLDVEDSQ IQSSSGAYWN TEEADSIIEA SSREPLDQFT VAPMVLQDQL FSIVDFSPSW  480
TYAGSKTKVL VTGRFLHANE VTERCKWSCM FGEVEIQAEI SADGTLRCYS PPHKPGRVPF  540
YVTCSNRLAC SEVREFEFRP SDSQYMDAPS PLGATNKVYF QIRLDNLLSL GPDVYQATIT  600
NPSKEMIDLS KKISSLLANN DEWSKLLKLA DDNEPLSHDQ QDQYAENLIK EKLHVWLLHK  660
VGNGGKGPSV LDDEGLGVLH LAAALGYDWA IRPTVTAGVN INFRDFHGWT ALHWAAFCGR  720
ERTVVALIAL GAAPGALTDP HPNYPAESTP ADLASANGHK GISGFLAESS LTSHLQALNL  780
KEANMSEISG LPGIGDITER NASQPAIGDS LGAVRNAAQA AARIYQVFRV QSFQRKQAVQ  840
YEGDKGGISD EHTLSLLSMK PSKSGQLDPL HAAASRIQNK YRGWKGRKEF LLFRQRIVKI  900
QAHVRGHQVR KHYRKIVWSV GIVEKVILRW RRRRAGLRGF RPTEGAIESS SGGTSSNLVT  960
DKPAGDDYDF LQEGRKQTEE RLQKALARVK SMVQYPEARD QYQRILNVVS KMQESQTVQE  1020
KILDESTEMD EGDFMSEFKE LWDDDTPLPG YF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G07770.1