PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G07640.3
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 577aa    MW: 66377.2 Da    PI: 6.2718
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G07640.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.92.8e-081512410128
              NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFsk.rdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102
                      +d e++  +L+++ + ++l+  +++  vd++ ++P+d p       + w+   + ++  y  +++  r++k+gyWk      ++ + +++  g+
  OGLUM10G07640.3  15 SDTEII-MFLAERKTWDPLPQ-NILVGVDLTMIDPRDSP------GTLWFLNWPdNQLCYDDENNVFRKAKNGYWKCVDA-CRIQT-GTSILGV 98 
                      689999.88888888899888.889************99......3456554440444566788889999******8866.56766.8999*** PP

              NAM 103 kktLvfykgrapkgektdWvmheyrl 128
                      k  L f++g++p g+++  +m ey +
  OGLUM10G07640.3  99 KLCLEFHEGQTPCGTRSGLMMYEYLI 124
                      ************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MVLPPLGIAV GDSWSDTEII MFLAERKTWD PLPQNILVGV DLTMIDPRDS PGTLWFLNWP  60
DNQLCYDDEN NVFRKAKNGY WKCVDACRIQ TGTSILGVKL CLEFHEGQTP CGTRSGLMMY  120
EYLIEQNDEL NLPQAYKSLC RMFLQEDRKI VEDEHISLNL GVHHNFLGSY SQYLAEIQRQ  180
NMVMNSQTKK VSSSENWMNE KARNGQAQGS TDKRFLIFGV YVTRLNNYLE LMIEEPRFSS  240
IAYVRLDSQV KKLDKEYTSA MDLSSSLHQM LQKLNLRVQD EEVWVSQLGS NLQASFRKIM  300
DTSSEIGKLE DEVLQLKVDI AEFAPGEVTS CAVYEMIKTL QIVELFMNNS TRHLKLIDGI  360
NSEMREFGSI FNGKVRCLVR FARYQQTIME KSTQIINFLG DIRAKVDKMT QMYGLSEVVP  420
IDSNQFIEGS FNADAYGTCS YYATLSSVES LYKREYASYP TILKDKIGQP DEFLVNLSRA  480
QLEDIVEDFY TRHKVKGSKR LNVCLDKMKN EGVISEESYM NPQAQMRMKE HIFLTKIKKV  540
IESHIMDGKV LIASFRITTG CYLIKSTKFQ KKIPNMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-12NAC family protein