PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G07640.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 592aa MW: 68174.5 Da PI: 6.6727

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G07640.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	25.8	3e-08	15	124	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFsk.rdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 +d e++ +L+++ + ++l+ +++ vd++ ++P+d p + w+ + ++ y +++ r++k+gyWk ++ + +++ g+ OGLUM10G07640.2 15 SDTEII-MFLAERKTWDPLPQ-NILVGVDLTMIDPRDSP------GTLWFLNWPdNQLCYDDENNVFRKAKNGYWKCVDA-CRIQT-GTSILGV 98 689999.88888888899888.889**********99......3456554440444566788889999**8866.56766.8999* PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 k L f++g++p g+++ +m ey + OGLUM10G07640.2 99 KLCLEFHEGQTPCGTRSGLMMYEYLI 124 ************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MVLPPLGIAV GDSWSDTEII MFLAERKTWD PLPQNILVGV DLTMIDPRDS PGTLWFLNWP 60 DNQLCYDDEN NVFRKAKNGY WKCVDACRIQ TGTSILGVKL CLEFHEGQTP CGTRSGLMMY 120 EYLIEQNDEL NLPQAYKSLC RMFLQEDRKI VEDEHISLNL GVHHNFLGSY SQYLAEIQRQ 180 NMVMNSQTKK VSSSENWMNE KARNGQAQGS TDKRFLIFGV YVTDHLFDNQ LKLLNIITRL 240 NNYLELMIEE PRFSSIAYVR LDSQVKKLDK EYTSAMDLSS SLHQMLQKLN LRVQDEEVWV 300 SQLGSNLQAS FRKIMDTSSE IGKLEDEVLQ LKVDIAEFAP GEVTSCAVYE MIKTLQIVEL 360 FMNNSTRHLK LIDGINSEMR EFGSIFNGKV RCLVRFARYQ QTIMEKSTQI INFLGDIRAK 420 VDKMTQMYGL SEVVPIDSNQ LILPPVRQQT SGTCSYYATL SSVESLYKRE YASYPTILKD 480 KIGQPDEFLV NLSRAQLEDI VEDFYTRHKV KGSKRLNVCL DKMKNEGVIS EESYMNPQAQ 540 MRMKEHIFLT KIKKVIESHI MDGKVLIASF RITTGCYLIK STKFQKKIPN MN

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MVLPPLGIAV GDSWSDTEII MFLAERKTWD PLPQNILVGV DLTMIDPRDS PGTLWFLNWP  60
DNQLCYDDEN NVFRKAKNGY WKCVDACRIQ TGTSILGVKL CLEFHEGQTP CGTRSGLMMY  120
EYLIEQNDEL NLPQAYKSLC RMFLQEDRKI VEDEHISLNL GVHHNFLGSY SQYLAEIQRQ  180
NMVMNSQTKK VSSSENWMNE KARNGQAQGS TDKRFLIFGV YVTDHLFDNQ LKLLNIITRL  240
NNYLELMIEE PRFSSIAYVR LDSQVKKLDK EYTSAMDLSS SLHQMLQKLN LRVQDEEVWV  300
SQLGSNLQAS FRKIMDTSSE IGKLEDEVLQ LKVDIAEFAP GEVTSCAVYE MIKTLQIVEL  360
FMNNSTRHLK LIDGINSEMR EFGSIFNGKV RCLVRFARYQ QTIMEKSTQI INFLGDIRAK  420
VDKMTQMYGL SEVVPIDSNQ LILPPVRQQT SGTCSYYATL SSVESLYKRE YASYPTILKD  480
KIGQPDEFLV NLSRAQLEDI VEDFYTRHKV KGSKRLNVCL DKMKNEGVIS EESYMNPQAQ  540
MRMKEHIFLT KIKKVIESHI MDGKVLIASF RITTGCYLIK STKFQKKIPN MN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-12	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G07640.2