PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G07520.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 321aa    MW: 33810.1 Da    PI: 8.7234
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G07520.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.2e-19123172255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+WvAeIr p++   r+r +lg+++tae+Aa a++ a+ +l+g
  OGLUM10G07520.1 123 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTYDTAEDAALAYDGAAFRLRG 172
                      59******9.**********955...5*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDRQWRCLAA AASTSGNSKL PPLPMALGGA VEYGQLVHGA AAPVAPFFVD AEQQSLSPAT  60
AMVLGAGWYN YNLVTPSQAA QLHHRLRRAV GAAPCSMKRC GGMAAAAAGR LALVGPAPVQ  120
AKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTYDTAEDAA LAYDGAAFRL RGDAARLNFP  180
ELRRGGRHHA PPLSASVDAK ILQATTTTTA DTAAAAAPAS TNTTPPPSPR VVKTEPGCCS  240
VSEASTTTTA DAADVSSTGS SPSPTSSNQA ATATPPAPRP PPPLPETIQQ LDFTEAPWDE  300
ADGFALRRYP SWEIDWDAIL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.11e-30ERF family protein