PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM10G03200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | C2H2 | ||||||||
Protein Properties | Length: 356aa MW: 39592.4 Da PI: 10.0063 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.9e-05 | 44 | 66 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C Cgk+F+++ + H ++H OGLUM10G03200.1 44 FACRVCGKRFPSQQAMAGHCSSH 66 78*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MSPMRPRSSS ASSTSPVAGK KEKTATKPAG GGARDPPKGR SSSFACRVCG KRFPSQQAMA 60 GHCSSHTRST AAATRITSAR QLLPPPPQSS LSPPPPLPVV ALTVQLAVLF WRLTPLLAAA 120 AVADWSQVAA GIPLSKEQLV VAVAIVVADD GQGQAAEVFL LDLAAEELNL GPSMNNEATS 180 IPKVTVRWVR SVYEYFTEAF DLLKEDNVQW CPYMEEETQR RAPANLNTLY LRDSSYWLTK 240 KMIVYDIAVE VYNLQRGDIA EELYSDTTSL WEKLRDNIAG SLEEMMSALD RMRQKCKRIM 300 RRHRAGMHQK STVPQDTGLR TPYWNNRLPL LGLPHRQDPQ LPHVLGRRQG LWHRLR |
Link Out ? help Back to Top | |
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Ensembl | OGLUM10G03200.1 |