PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM09G19780.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | B3 | ||||||||
Protein Properties | Length: 404aa MW: 45519.7 Da PI: 10.0003 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.3 | 1.2e-17 | 32 | 121 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ff vl++ ++ r+ +p +f ++ ++++++ +++l d+sg++W+ +l + s+++++ GWkeFv++n ++ g f+vF++d+ s+f OGLUM09G19780.3 32 FFRVLLT--LQSLERMKIPSSFN-QClQNQPTG--MVSLVDRSGNKWSAEL--TSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKWSQF--S 116 5666633..4456679******8.564767666..8***************..********************************966888..8 PP EEEE- CS B3 94 vkvfr 98 v+vf+ OGLUM09G19780.3 117 VTVFE 121 88876 PP | |||||||
2 | B3 | 52.3 | 1e-16 | 298 | 389 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++++ s+v + +p +f++e+ ++++k +tl d++g+ Wev++ y ++ +++GW +F+ n+L+ D++vF+l+++++ +v++ OGLUM09G19780.3 298 QIMMESYVYVGFFMNIPCEFVRECL--PRTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDN--IKVHI 387 6789999999**************5..345678***************995555556799*********************998444..57887 PP E- CS B3 97 fr 98 +r OGLUM09G19780.3 388 YR 389 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 404 aa Download sequence |
MVVREKQGGR MGKGKGKGKE KEGDINCFGR SFFRVLLTLQ SLERMKIPSS FNQCLQNQPT 60 GMVSLVDRSG NKWSAELTSD SEGFFFVHGW KEFVRDNSIQ CGQFLVFTYD KWSQFSVTVF 120 EPSGIDKIST FSAHPSKNVI IKTESDEGGM VTAAITTEKM APALKENNGI TGKRTRDVDY 180 LMEDRVVVFK KSSEANVCES SRRKRAGASA GKSKVTSTSH NSTRGSSCSS DEDNSSSKSP 240 NPPFLMRFLS GEVSRRGVSK GQRQLTVISQ RRPVTEAEKD HALQRAREFK SKNPFAVQIM 300 MESYVYVGFF MNIPCEFVRE CLPRTNKRIT LWDPQGKAWE VNYVYYSDRS VGSFSGGWGK 360 FAVGNNLEKF DVCVFELVQK DNIKVHIYRV VPEITPHKLR SDPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 5e-19 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM09G19780.3 |