PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM09G15640.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 702aa MW: 77178.1 Da PI: 4.5407

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM09G15640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	147.9	5.4e-46	11	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 ppGfrF+Ptdeelv ++Lk+++++ + + i++vd+yk++P++Lp+ ++++++k+w+fFs+ d+ky++g+r++r+t +gyWkatgkd++++ OGLUM09G15640.1 11 PPGFRFSPTDEELVLYFLKRRIATGRPTP--YIADVDVYKSHPSHLPErsALRTGDKQWFFFSRMDRKYPNGTRASRTTGEGYWKATGKDRSIC 102 8*******************9999555..6**********9435778899************************************ PP NAM 94 sk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++vg kktLv+++grap+ge+tdWvmhey+l OGLUM09G15640.1 103 NGggggaaSGRAVGSKKTLVYHHGRAPRGERTDWVMHEYTL 143 98877777777**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MGMENPPLRW PPGFRFSPTD EELVLYFLKR RIATGRPTPY IADVDVYKSH PSHLPERSAL 60 RTGDKQWFFF SRMDRKYPNG TRASRTTGEG YWKATGKDRS ICNGGGGGAA SGRAVGSKKT 120 LVYHHGRAPR GERTDWVMHE YTLLADALPP AARDREAYAL YKLFHKSGAG PKNGEQYGAP 180 FREEDWLDDD DHHHDQLPAE AALPAPATTS GRAATTEEHA DFELPGGDLD VLLAQIENDQ 240 DIIEAQLDFS THVTSQVQIQ HRVHQGWLSD DGGKSDVADA TTSGSALLMA ENTCAELPID 300 GLEQLLMQIS DDQQTVEMLS GFSASVPQSQ LQHDDHQGCL GVHREEVGVA DSTTVSSAVV 360 TEECTVRELQ DIEGLLMQIE NDQENAESLP DFSTPVHLHD CHQAAFGDFQ GSQRATFNIA 420 NLSTMVQESP NFDLQTGPSN QITESILTTE PMNGETNAVE ETSPLRSMSV LGSYDRQDGD 480 DEFLEINDFF DPEDLEQILG STTSQNLIPA DDGVFDSLQY SDAPMFLPGS FDTTGVVAEN 540 HYVEFGASGI QNQGFQHTTE LWAHNQVALN VRNHMKDNHV VFSHSSDATI IHTVNEQPPN 600 RSSNASQSWF NGALSALLDS VPSSPAMAAE NIGLNRTLQR ISSFRSQQPA REEVSSTLIN 660 TRRRGGGLIF ISLMVLLVAI MWTFSNGSAV KLSKGLWKFP ST

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MGMENPPLRW PPGFRFSPTD EELVLYFLKR RIATGRPTPY IADVDVYKSH PSHLPERSAL  60
RTGDKQWFFF SRMDRKYPNG TRASRTTGEG YWKATGKDRS ICNGGGGGAA SGRAVGSKKT  120
LVYHHGRAPR GERTDWVMHE YTLLADALPP AARDREAYAL YKLFHKSGAG PKNGEQYGAP  180
FREEDWLDDD DHHHDQLPAE AALPAPATTS GRAATTEEHA DFELPGGDLD VLLAQIENDQ  240
DIIEAQLDFS THVTSQVQIQ HRVHQGWLSD DGGKSDVADA TTSGSALLMA ENTCAELPID  300
GLEQLLMQIS DDQQTVEMLS GFSASVPQSQ LQHDDHQGCL GVHREEVGVA DSTTVSSAVV  360
TEECTVRELQ DIEGLLMQIE NDQENAESLP DFSTPVHLHD CHQAAFGDFQ GSQRATFNIA  420
NLSTMVQESP NFDLQTGPSN QITESILTTE PMNGETNAVE ETSPLRSMSV LGSYDRQDGD  480
DEFLEINDFF DPEDLEQILG STTSQNLIPA DDGVFDSLQY SDAPMFLPGS FDTTGVVAEN  540
HYVEFGASGI QNQGFQHTTE LWAHNQVALN VRNHMKDNHV VFSHSSDATI IHTVNEQPPN  600
RSSNASQSWF NGALSALLDS VPSSPAMAAE NIGLNRTLQR ISSFRSQQPA REEVSSTLIN  660
TRRRGGGLIF ISLMVLLVAI MWTFSNGSAV KLSKGLWKFP ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34180.1	2e-62	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM09G15640.1